RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g57340.1 View Network Show in Genome Browser |
| Other Names | Os03g0787300 |
| Description | chaperone protein dnaJ, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 32708411-32711331 Nucleotide Length: 1254 |
| Protein-coding | LOC_Os03g57340 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g16860 LOC_Os01g62290 LOC_Os03g16920 LOC_Os01g08560 LOC_Os02g02410 LOC_Os03g02260 LOC_Os02g53420 LOC_Os03g50250 LOC_Os01g49430 LOC_Os03g16880 LOC_Os01g33360 More.. |
| Downstream Genes | LOC_Os05g38530 LOC_Os11g47760 LOC_Os03g60620 LOC_Os05g08840 LOC_Os09g33780 LOC_Os09g31486 LOC_Os11g08460 LOC_Os12g05760 LOC_Os08g09770 LOC_Os05g30480 LOC_Os11g08440 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g57340.1 |
| Rice Genome Annotation | LOC_Os03g57340.1 |
| Ricechip | LOC_Os03g57340.1 |
| KEGG | osa:4334359 dosa:Os03t0787300-01 |
| Entrez-Gene | 4334359 |