RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g57410.1 View Network Show in Genome Browser |
| Other Names | Os03g0788100 |
| Description | RING-H2 finger protein ATL5D, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 32736206-32737399 Nucleotide Length: 627 |
| Protein-coding | LOC_Os03g57410 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005488 | binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g54010 LOC_Os01g53810 LOC_Os02g57710 LOC_Os01g53800 LOC_Os01g68620 LOC_Os02g16620 LOC_Os03g03540 LOC_Os02g32740 |
| Downstream Genes | LOC_Os11g24540 LOC_Os06g51430 LOC_Os03g57660 LOC_Os06g30750 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g57410.1 |
| Rice Genome Annotation | LOC_Os03g57410.1 |
| Ricechip | LOC_Os03g57410.1 |
| KEGG | osa:4334362 dosa:Os03t0788100-01 |
| Entrez-Gene | 4334362 |