RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g57460.1 View Network Show in Genome Browser |
| Other Names | Os03g0788600 |
| Description | fasciclin domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 32757006-32760635 Nucleotide Length: 1425 |
| Protein-coding | LOC_Os03g57460 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g02940 LOC_Os01g06580 LOC_Os03g52630 LOC_Os03g14250 LOC_Os01g47780 LOC_Os03g56380 LOC_Os03g06350 LOC_Os02g18410 |
| Downstream Genes | LOC_Os05g32110 LOC_Os09g07350 LOC_Os07g27810 LOC_Os12g13160 LOC_Os09g30486 LOC_Os08g23180 LOC_Os05g38500 LOC_Os04g48490 LOC_Os07g43990 LOC_Os04g47180 LOC_Os11g02350 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2866 osa-miR2923 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g57460.1 |
| Rice Genome Annotation | LOC_Os03g57460.1 |
| Ricechip | LOC_Os03g57460.1 |
| KEGG | osa:4334367 dosa:Os03t0788600-02 |
| Entrez-Gene | 4334367 |