RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g57870.1 View Network Show in Genome Browser |
| Other Names | Os03g0792600 |
| Description | RFC3 - Putative clamp loader of PCNA, replication factor C subunit 3, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 32964011-32967777 Nucleotide Length: 1065 |
| Protein-coding | LOC_Os03g57870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g53500 LOC_Os02g08380 LOC_Os03g13850 LOC_Os02g56130 LOC_Os03g15810 LOC_Os02g03340 LOC_Os03g10780 LOC_Os03g03650 LOC_Os02g30800 LOC_Os03g22160 LOC_Os03g22450 More.. |
| Downstream Genes | LOC_Os11g36390 LOC_Os12g07720 LOC_Os04g48060 LOC_Os10g34750 LOC_Os05g48030 LOC_Os05g06840 LOC_Os05g29010 LOC_Os11g28350 LOC_Os07g44970 LOC_Os06g50910 LOC_Os05g06890 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g57870.1 |
| Rice Genome Annotation | LOC_Os03g57870.1 |
| Ricechip | LOC_Os03g57870.1 |
| KEGG | osa:4334389 dosa:Os03t0792600-01 |
| Entrez-Gene | 4334389 |