RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g57960.1 View Network Show in Genome Browser |
| Other Names | Os03g0793700 |
| Description | cupin domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 33020035-33022949 Nucleotide Length: 1413 |
| Protein-coding | LOC_Os03g57960 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g10110 LOC_Os03g46100 LOC_Os01g55690 LOC_Os02g16820 LOC_Os02g15178 LOC_Os02g15169 |
| Downstream Genes | LOC_Os04g46200 LOC_Os07g11380 LOC_Os07g11360 LOC_Os07g11330 LOC_Os06g31070 LOC_Os06g31060 LOC_Os07g10580 LOC_Os07g10570 LOC_Os03g62590 LOC_Os11g37270 LOC_Os09g30240 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g57960.1 |
| Rice Genome Annotation | LOC_Os03g57960.1 |
| Ricechip | LOC_Os03g57960.1 |
| KEGG | osa:4334398 dosa:Os03t0793700-01 |
| Entrez-Gene | 4334398 |