RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g58130.1 View Network Show in Genome Browser |
| Other Names | Os03g0795500 |
| Description | thioredoxin, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 33096171-33099765 Nucleotide Length: 576 |
| Protein-coding | LOC_Os03g58130 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g10340 LOC_Os02g01010 LOC_Os02g58640 LOC_Os03g29240 LOC_Os01g58194 LOC_Os03g29190 LOC_Os02g34940 LOC_Os02g52250 LOC_Os01g68940 LOC_Os01g04730 LOC_Os01g68950 More.. |
| Downstream Genes | LOC_Os09g27830 LOC_Os05g47930 LOC_Os04g51920 LOC_Os11g09280 LOC_Os04g35600 LOC_Os07g07220 LOC_Os09g32976 LOC_Os08g23710 LOC_Os12g05430 LOC_Os10g30300 LOC_Os05g02490 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR531b |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g58130.1 |
| Rice Genome Annotation | LOC_Os03g58130.1 |
| Ricechip | LOC_Os03g58130.1 |
| KEGG | osa:4334415 dosa:Os03t0795500-01 |
| Entrez-Gene | 4334415 |