RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os03g58160.2 View Network Show in Genome Browser
Other Names	Os03g0795900
Description	heat stress transcription factor, putative, expressed
Gene Attributes	Chromosome: Chr3 CDS Coordinates (5'-3'): 33105840-33109091 Nucleotide Length: 591
Protein-coding	LOC_Os03g58160

Gene Ontology Classification
GO	Name	Type	Code
GO:0008150	biological_process	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0003677	DNA binding	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0003700	sequence-specific DNA binding transcription factor activity	Molecular Function	IEA
GO:0005623	cell	Cellular Component	IEA
GO:0005634	nucleus	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os03g16030 LOC_Os03g16020 LOC_Os03g15960 LOC_Os03g16920 LOC_Os03g16040 LOC_Os01g04380 LOC_Os01g04370 LOC_Os02g34840 LOC_Os01g04360 LOC_Os03g45410 LOC_Os03g16860 More..
Downstream Genes	LOC_Os05g45420 LOC_Os09g35790 LOC_Os08g43334 LOC_Os05g01710 LOC_Os05g28010 LOC_Os05g38530 LOC_Os12g39070 LOC_Os05g44340 LOC_Os03g63920 LOC_Os08g37800 LOC_Os05g03910 More..

miRNA Regulations
miRNAs	osa-miR172d-5p

Database Links
Gramene	LOC_Os03g58160.2
Rice Genome Annotation	LOC_Os03g58160.2
Ricechip	LOC_Os03g58160.2
KEGG	osa:4334418 dosa:Os03t0795900-01
Entrez-Gene	4334418