RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g58240.1 View Network Show in Genome Browser |
| Other Names | Os03g0796800 |
| Description | GTP binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 33180998-33187229 Nucleotide Length: 1185 |
| Protein-coding | LOC_Os03g58240 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g68710 LOC_Os01g64280 LOC_Os02g55770 LOC_Os02g55720 LOC_Os02g55710 LOC_Os02g55670 LOC_Os02g55640 LOC_Os01g14932 LOC_Os03g55389 LOC_Os02g05840 |
| Downstream Genes | LOC_Os07g36200 LOC_Os07g08120 LOC_Os05g24601 LOC_Os04g30760 LOC_Os11g37480 LOC_Os05g06280 LOC_Os08g33120 LOC_Os04g36700 LOC_Os05g14170 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g58240.1 |
| Rice Genome Annotation | LOC_Os03g58240.1 |
| Ricechip | LOC_Os03g58240.1 |
| KEGG | osa:4334423 dosa:Os03t0796800-00 |
| Entrez-Gene | 4334423 |