RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g58470.1 View Network Show in Genome Browser |
| Other Names | Os03g0799000 |
| Description | retrotransposon protein, putative, Ty3-gypsy subclass, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 33304497-33305990 Nucleotide Length: 882 |
| Protein-coding | LOC_Os03g58470 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g62230 LOC_Os01g05610 LOC_Os01g05630 LOC_Os01g05970 LOC_Os01g05900 LOC_Os01g06010 LOC_Os01g51154 LOC_Os03g17084 LOC_Os03g24339 LOC_Os03g02680 LOC_Os01g27940 More.. |
| Downstream Genes | LOC_Os08g38300 LOC_Os08g33100 LOC_Os05g49860 LOC_Os12g25120 LOC_Os07g36130 LOC_Os07g36140 LOC_Os07g09060 LOC_Os08g01054 LOC_Os07g46180 LOC_Os06g44370 LOC_Os10g17770 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2925 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g58470.1 |
| Rice Genome Annotation | LOC_Os03g58470.1 |
| Ricechip | LOC_Os03g58470.1 |
| KEGG | osa:4334439 dosa:Os03t0799000-01 |
| Entrez-Gene | 4334439 |