RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g58540.2 View Network Show in Genome Browser |
| Other Names | Os03g0799700 |
| Description | spo0B-associated GTP-binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 33334430-33338512 Nucleotide Length: 1503 |
| Protein-coding | LOC_Os03g58540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g69950 LOC_Os02g15900 LOC_Os01g55890 LOC_Os01g62900 LOC_Os01g48690 LOC_Os01g50050 LOC_Os01g50760 LOC_Os03g02030 LOC_Os01g72800 |
| Downstream Genes | LOC_Os08g31228 LOC_Os08g31219 LOC_Os04g25540 LOC_Os05g48410 LOC_Os05g38150 LOC_Os12g17320 LOC_Os05g50550 LOC_Os09g32030 LOC_Os06g46450 LOC_Os08g09370 LOC_Os04g56210 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g58540.2 |
| Rice Genome Annotation | LOC_Os03g58540.2 |
| Ricechip | LOC_Os03g58540.2 |
| KEGG | osa:4334445 dosa:Os03t0799700-01 |
| Entrez-Gene | 4334445 |