RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g58710.1 View Network Show in Genome Browser |
| Other Names | Os03g0801700 |
| Description | riboflavin biosynthesis protein-related, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 33433222-33436715 Nucleotide Length: 1176 |
| Protein-coding | LOC_Os03g58710 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g53770 LOC_Os03g25450 LOC_Os03g52180 LOC_Os01g48690 LOC_Os03g52170 LOC_Os02g55940 LOC_Os02g09120 LOC_Os03g11410 LOC_Os01g53700 LOC_Os01g73550 LOC_Os03g08440 More.. |
| Downstream Genes | LOC_Os10g32730 LOC_Os11g38600 LOC_Os07g44190 LOC_Os04g48700 LOC_Os05g01750 LOC_Os06g04610 LOC_Os06g07896 LOC_Os06g43760 LOC_Os05g51500 LOC_Os12g34550 LOC_Os05g44916 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00740 rn01100 |
| Metacyc Pathways | RIBOSYN2-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g58710.1 |
| Rice Genome Annotation | LOC_Os03g58710.1 |
| Ricechip | LOC_Os03g58710.1 |
| KEGG | osa:4334460 dosa:Os03t0801700-01 |
| Entrez-Gene | 4334460 |