RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g58800.1 View Network Show in Genome Browser |
| Other Names | Os03g0802600 |
| Description | ATPase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 33487653-33489941 Nucleotide Length: 1536 |
| Protein-coding | LOC_Os03g58800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g16670 LOC_Os03g05730 LOC_Os01g62040 LOC_Os02g21970 LOC_Os03g18690 LOC_Os01g66330 LOC_Os03g31300 LOC_Os01g56600 LOC_Os03g14280 LOC_Os02g41470 LOC_Os03g19990 More.. |
| Downstream Genes | LOC_Os07g42632 LOC_Os07g08170 LOC_Os10g30580 LOC_Os05g08950 LOC_Os07g49150 LOC_Os06g49140 LOC_Os05g49230 LOC_Os03g60750 LOC_Os12g07720 LOC_Os09g27270 LOC_Os08g45010 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g58800.1 |
| Rice Genome Annotation | LOC_Os03g58800.1 |
| Ricechip | LOC_Os03g58800.1 |
| KEGG | osa:4334468 dosa:Os03t0802600-01 |
| Entrez-Gene | 4334468 |