RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g59310.1 View Network Show in Genome Browser |
| Other Names | Os03g0807800 |
| Description | ribosomal protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 33769018-33770923 Nucleotide Length: 825 |
| Protein-coding | LOC_Os03g59310 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g59990 LOC_Os02g14059 LOC_Os02g27760 LOC_Os01g10820 LOC_Os03g18570 LOC_Os03g18580 LOC_Os02g01560 LOC_Os01g54870 LOC_Os01g64090 LOC_Os03g22180 LOC_Os02g01332 More.. |
| Downstream Genes | LOC_Os12g38000 LOC_Os11g29190 LOC_Os07g12250 LOC_Os07g10720 LOC_Os05g30530 LOC_Os05g40820 LOC_Os09g31180 LOC_Os06g35730 LOC_Os05g11710 LOC_Os05g27940 LOC_Os04g28180 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g59310.1 |
| Rice Genome Annotation | LOC_Os03g59310.1 |
| Ricechip | LOC_Os03g59310.1 |
| KEGG | osa:4334512 dosa:Os03t0807800-01 |
| Entrez-Gene | 4334512 |