RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g59530.1 View Network Show in Genome Browser |
| Other Names | Os03g0809700 |
| Description | protein Kinase-associated protein phosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 33886820-33891887 Nucleotide Length: 1686 |
| Protein-coding | LOC_Os03g59530 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g03560 LOC_Os02g17970 LOC_Os03g05730 LOC_Os01g14860 LOC_Os03g16130 LOC_Os02g55560 LOC_Os03g53880 LOC_Os02g05630 LOC_Os01g13060 LOC_Os02g02780 LOC_Os02g03060 More.. |
| Downstream Genes | LOC_Os11g07050 LOC_Os10g34580 LOC_Os08g41710 LOC_Os08g23680 LOC_Os07g09320 LOC_Os06g16430 LOC_Os04g33050 LOC_Os07g35750 LOC_Os07g35700 LOC_Os07g43560 LOC_Os07g35740 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2118h osa-miR2118k |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g59530.1 |
| Rice Genome Annotation | LOC_Os03g59530.1 |
| Ricechip | LOC_Os03g59530.1 |
| KEGG | osa:4334526 dosa:Os03t0809700-01 |
| Entrez-Gene | 4334526 |