RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g59550.1 View Network Show in Genome Browser |
| Other Names | Os03g0809900 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 33894809-33899648 Nucleotide Length: 594 |
| Protein-coding | LOC_Os03g59550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005654 | nucleoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g15890 LOC_Os02g51890 LOC_Os02g48340 LOC_Os03g17010 LOC_Os01g72834 LOC_Os03g24890 LOC_Os03g03140 LOC_Os02g40900 LOC_Os03g25960 LOC_Os02g12850 LOC_Os02g52140 More.. |
| Downstream Genes | LOC_Os11g45590 LOC_Os05g13650 LOC_Os10g30370 LOC_Os12g18880 LOC_Os06g11730 LOC_Os09g37720 LOC_Os12g37400 LOC_Os09g24210 LOC_Os09g10760 LOC_Os08g44290 LOC_Os04g58590 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g59550.1 |
| Rice Genome Annotation | LOC_Os03g59550.1 |
| Ricechip | LOC_Os03g59550.1 |
| KEGG | osa:4334528 dosa:Os03t0809900-01 |
| Entrez-Gene | 4334528 |