RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g59580.1 View Network Show in Genome Browser |
| Other Names | Os03g0810300 |
| Description | hydrolase, NUDIX family, domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 33916812-33921098 Nucleotide Length: 552 |
| Protein-coding | LOC_Os03g59580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g56210 LOC_Os02g55030 LOC_Os01g38510 LOC_Os01g25386 LOC_Os03g57040 LOC_Os03g55240 LOC_Os02g38230 |
| Downstream Genes | LOC_Os08g28840 LOC_Os06g04910 LOC_Os07g36190 LOC_Os06g03910 LOC_Os04g58900 LOC_Os04g46280 LOC_Os05g34180 LOC_Os08g28860 LOC_Os04g58640 LOC_Os05g11870 LOC_Os10g38980 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5542 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g59580.1 |
| Rice Genome Annotation | LOC_Os03g59580.1 |
| Ricechip | LOC_Os03g59580.1 |
| KEGG | osa:4334531 dosa:Os03t0810300-01 |
| Entrez-Gene | 4334531 |