RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g60000.1 View Network Show in Genome Browser |
| Other Names | Os03g0814600 |
| Description | SPFH domain/Band 7 family protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 34125740-34128214 Nucleotide Length: 1263 |
| Protein-coding | LOC_Os03g60000 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g37000 |
| Downstream Genes | LOC_Os04g38900 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5523 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g60000.1 |
| Rice Genome Annotation | LOC_Os03g60000.1 |
| Ricechip | LOC_Os03g60000.1 |
| KEGG | dosa:Os03t0814600-00 |