RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g60380.1 View Network Show in Genome Browser |
| Other Names | Os03g0818200 |
| Description | cinnamoyl CoA reductase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 34340287-34343760 Nucleotide Length: 1005 |
| Protein-coding | LOC_Os03g60380 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g26814 LOC_Os01g15120 LOC_Os01g69970 LOC_Os01g15130 LOC_Os02g47620 LOC_Os02g11050 LOC_Os02g04710 LOC_Os03g49210 |
| Downstream Genes | LOC_Os06g02160 LOC_Os05g51670 LOC_Os06g25439 LOC_Os09g09480 LOC_Os06g40620 LOC_Os12g02830 LOC_Os11g03060 LOC_Os10g35540 LOC_Os07g38830 LOC_Os10g35520 LOC_Os10g35530 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00052 rn00520 rn01100 rn01110 |
| Metacyc Pathways | PWY-2582 UDPNACETYLGALSYN-PWY PWY-3821 P61-PWY GALACTMETAB-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g60380.1 |
| Rice Genome Annotation | LOC_Os03g60380.1 |
| Ricechip | LOC_Os03g60380.1 |
| KEGG | osa:4334578 dosa:Os03t0818200-01 |
| Entrez-Gene | 4334578 |