RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g60460.1 View Network Show in Genome Browser |
| Other Names | Os03g0819100 |
| Description | aminopeptidase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 34378157-34382361 Nucleotide Length: 1836 |
| Protein-coding | LOC_Os03g60460 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g02560 LOC_Os02g52860 LOC_Os02g13640 LOC_Os01g59800 LOC_Os01g74000 LOC_Os02g50230 LOC_Os02g45650 LOC_Os01g67590 LOC_Os01g09460 LOC_Os02g02320 LOC_Os01g54030 More.. |
| Downstream Genes | LOC_Os09g38030 LOC_Os07g29620 LOC_Os06g09170 LOC_Os04g40650 LOC_Os06g10810 LOC_Os09g24440 LOC_Os06g47210 LOC_Os10g11140 LOC_Os12g19090 LOC_Os06g44910 LOC_Os04g37600 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00480 rn01100 rn00590 |
| Metacyc Pathways | PWY-4041 PWY-4061 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g60460.1 |
| Rice Genome Annotation | LOC_Os03g60460.1 |
| Ricechip | LOC_Os03g60460.1 |
| KEGG | osa:4334583 dosa:Os03t0819100-01 |
| Entrez-Gene | 4334583 |