RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g60550.2 View Network Show in Genome Browser |
| Other Names | Os03g0820100 |
| Description | ThiF family domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 34412840-34419163 Nucleotide Length: 1374 |
| Protein-coding | LOC_Os03g60550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16540 LOC_Os02g07260 LOC_Os01g68950 LOC_Os01g68940 LOC_Os01g42850 LOC_Os03g57790 LOC_Os03g03130 LOC_Os02g07120 LOC_Os02g53060 LOC_Os02g30310 LOC_Os02g32460 More.. |
| Downstream Genes | LOC_Os07g39780 LOC_Os06g45710 LOC_Os08g28680 LOC_Os10g11260 LOC_Os05g41640 LOC_Os09g15320 LOC_Os06g14040 LOC_Os07g07240 LOC_Os05g08960 LOC_Os10g39120 LOC_Os11g01510 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g60550.2 |
| Rice Genome Annotation | LOC_Os03g60550.2 |
| Ricechip | LOC_Os03g60550.2 |
| KEGG | osa:4334591 dosa:Os03t0820100-01 |
| Entrez-Gene | 4334591 |