RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g60720.1 View Network Show in Genome Browser |
| Other Names | Os03g0822000 |
| Description | expansin precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 34508262-34511279 Nucleotide Length: 795 |
| Protein-coding | LOC_Os03g60720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g15940 LOC_Os02g15810 LOC_Os02g34850 |
| Downstream Genes | LOC_Os12g32620 LOC_Os09g29710 LOC_Os09g29690 LOC_Os09g28690 LOC_Os04g43020 LOC_Os07g09620 LOC_Os08g41910 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g60720.1 |
| Rice Genome Annotation | LOC_Os03g60720.1 |
| Ricechip | LOC_Os03g60720.1 |
| KEGG | osa:4334606 dosa:Os03t0822000-01 |
| Entrez-Gene | 4334606 |