RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g60740.1 View Network Show in Genome Browser |
| Other Names | Os03g0822200 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 34526481-34529102 Nucleotide Length: 774 |
| Protein-coding | LOC_Os03g60740 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g57180 LOC_Os03g29170 LOC_Os03g18740 LOC_Os02g57990 LOC_Os03g16980 LOC_Os03g17000 LOC_Os03g07140 LOC_Os03g59610 LOC_Os03g29150 |
| Downstream Genes | LOC_Os06g44270 LOC_Os06g04620 LOC_Os07g49120 LOC_Os04g10010 LOC_Os04g10000 LOC_Os05g51670 LOC_Os06g44260 LOC_Os04g33240 LOC_Os08g28730 LOC_Os09g15420 LOC_Os03g61740 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g60740.1 |
| Rice Genome Annotation | LOC_Os03g60740.1 |
| Ricechip | LOC_Os03g60740.1 |
| KEGG | osa:4334608 dosa:Os03t0822200-01 |
| Entrez-Gene | 4334608 |