RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g60750.1 View Network Show in Genome Browser |
| Other Names | Os03g0822300 |
| Description | ribosomal RNA large subunit methyltransferase J, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 34529176-34531831 Nucleotide Length: 702 |
| Protein-coding | LOC_Os03g60750 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g43150 LOC_Os01g39260 LOC_Os01g39250 LOC_Os01g40820 LOC_Os02g54340 LOC_Os02g21970 LOC_Os02g43350 LOC_Os03g22420 LOC_Os01g43480 LOC_Os01g12660 LOC_Os01g45450 More.. |
| Downstream Genes | LOC_Os10g36860 LOC_Os10g30580 LOC_Os06g51029 LOC_Os07g42632 LOC_Os06g45820 LOC_Os06g09290 LOC_Os06g12370 LOC_Os11g14230 LOC_Os10g22700 LOC_Os07g47530 LOC_Os05g50750 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g60750.1 |
| Rice Genome Annotation | LOC_Os03g60750.1 |
| Ricechip | LOC_Os03g60750.1 |
| KEGG | osa:4334609 dosa:Os03t0822300-01 |
| Entrez-Gene | 4334609 |