RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g60780.1 View Network Show in Genome Browser |
| Other Names | Os03g0822700 |
| Description | armadillo/beta-catenin-like repeat containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 34536279-34539335 Nucleotide Length: 1140 |
| Protein-coding | LOC_Os03g60780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g62290 LOC_Os02g56900 LOC_Os02g53420 |
| Downstream Genes | LOC_Os05g23740 LOC_Os05g28290 LOC_Os05g48930 LOC_Os06g39240 LOC_Os05g38530 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g60780.1 |
| Rice Genome Annotation | LOC_Os03g60780.1 |
| Ricechip | LOC_Os03g60780.1 |
| KEGG | osa:4334611 dosa:Os03t0822700-01 |
| Entrez-Gene | 4334611 |