RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g60920.1 View Network Show in Genome Browser |
| Other Names | Os03g0824200 |
| Description | Methyltransferase small domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 34614571-34616975 Nucleotide Length: 858 |
| Protein-coding | LOC_Os03g60920 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g53890 LOC_Os02g35060 LOC_Os02g56020 LOC_Os03g55330 LOC_Os02g50990 LOC_Os01g37560 LOC_Os03g49580 LOC_Os02g51490 LOC_Os02g43550 LOC_Os01g71270 LOC_Os03g10990 More.. |
| Downstream Genes | LOC_Os07g43020 LOC_Os05g33040 LOC_Os04g46000 LOC_Os06g12990 LOC_Os06g06730 LOC_Os04g25360 LOC_Os04g25990 LOC_Os04g51400 LOC_Os07g39870 LOC_Os06g12560 LOC_Os10g39770 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | P61-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g60920.1 |
| Rice Genome Annotation | LOC_Os03g60920.1 |
| Ricechip | LOC_Os03g60920.1 |
| KEGG | osa:4334624 dosa:Os03t0824200-01 |
| Entrez-Gene | 4334624 |