RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g60939.1 View Network Show in Genome Browser |
| Other Names | Os03g0824400 |
| Description | dolichyl-phosphate beta-glycosyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 34630745-34633360 Nucleotide Length: 732 |
| Protein-coding | LOC_Os03g60939 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g62840 LOC_Os02g01920 LOC_Os03g16150 LOC_Os02g09930 LOC_Os03g57790 LOC_Os01g56130 LOC_Os03g08300 LOC_Os02g34884 LOC_Os02g39830 LOC_Os03g08280 LOC_Os03g59020 More.. |
| Downstream Genes | LOC_Os06g42020 LOC_Os05g43530 LOC_Os08g13930 LOC_Os07g07240 LOC_Os05g08960 LOC_Os11g20384 LOC_Os10g08879 LOC_Os06g36890 LOC_Os10g41150 LOC_Os08g42020 LOC_Os11g38810 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5529 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00510 rn01100 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g60939.1 |
| Rice Genome Annotation | LOC_Os03g60939.1 |
| Ricechip | LOC_Os03g60939.1 |
| KEGG | osa:4334626 dosa:Os03t0824400-01 |
| Entrez-Gene | 4334626 |