RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g61110.1 View Network Show in Genome Browser |
| Other Names | Os03g0826400 |
| Description | RNA-binding motif protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 34712797-34715106 Nucleotide Length: 939 |
| Protein-coding | LOC_Os03g61110 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g21140 LOC_Os03g45410 LOC_Os02g39050 LOC_Os01g63890 LOC_Os02g58090 LOC_Os02g14780 LOC_Os02g54700 LOC_Os02g04320 LOC_Os03g60930 LOC_Os02g39890 LOC_Os02g37430 More.. |
| Downstream Genes | LOC_Os04g28090 LOC_Os08g08080 LOC_Os05g30410 LOC_Os04g56760 LOC_Os03g63730 LOC_Os06g07350 LOC_Os04g32340 LOC_Os12g39070 LOC_Os12g01190 LOC_Os07g18050 LOC_Os10g02630 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g61110.1 |
| Rice Genome Annotation | LOC_Os03g61110.1 |
| Ricechip | LOC_Os03g61110.1 |
| KEGG | osa:4334639 dosa:Os03t0826400-01 |
| Entrez-Gene | 4334639 |