RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g61220.1 View Network Show in Genome Browser |
| Other Names | Os03g0827700 |
| Description | DEAD-box ATP-dependent RNA helicase 3, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 34765939-34772346 Nucleotide Length: 2277 |
| Protein-coding | LOC_Os03g61220 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g45400 LOC_Os01g43120 LOC_Os03g52640 LOC_Os03g17710 LOC_Os01g61320 LOC_Os01g04900 LOC_Os01g03660 |
| Downstream Genes | LOC_Os08g44290 LOC_Os10g12354 LOC_Os11g36480 LOC_Os10g39820 LOC_Os09g37720 LOC_Os07g08960 LOC_Os03g61990 LOC_Os11g37130 LOC_Os06g39906 LOC_Os04g52100 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00230 rn00680 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g61220.1 |
| Rice Genome Annotation | LOC_Os03g61220.1 |
| Ricechip | LOC_Os03g61220.1 |
| KEGG | osa:4334649 dosa:Os03t0827700-01 |
| Entrez-Gene | 4334649 |