RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g61290.1 View Network Show in Genome Browser |
| Other Names | Os03g0828600 |
| Description | ATCHX, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 34802922-34807906 Nucleotide Length: 2343 |
| Protein-coding | LOC_Os03g61290 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g07830 LOC_Os03g17790 LOC_Os02g42860 LOC_Os03g53720 LOC_Os03g54100 |
| Downstream Genes | LOC_Os09g11450 LOC_Os04g51820 LOC_Os05g03130 LOC_Os04g45040 LOC_Os09g30446 LOC_Os10g35990 LOC_Os07g01810 LOC_Os09g38560 LOC_Os07g44180 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g61290.1 |
| Rice Genome Annotation | LOC_Os03g61290.1 |
| Ricechip | LOC_Os03g61290.1 |
| KEGG | osa:9270824 dosa:Os03t0828600-00 |
| Entrez-Gene | 9270824 |