RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g61600.1 View Network Show in Genome Browser |
| Other Names | Os03g0831500 |
| Description | phosphoribosylformylglycinamidine synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 34923862-34926706 Nucleotide Length: 1197 |
| Protein-coding | LOC_Os03g61600 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g66500 LOC_Os01g52390 LOC_Os02g56990 LOC_Os02g02130 LOC_Os03g21940 LOC_Os01g51020 LOC_Os03g58430 LOC_Os01g42990 LOC_Os03g38260 LOC_Os03g40180 LOC_Os02g01560 More.. |
| Downstream Genes | LOC_Os08g39160 LOC_Os05g18790 LOC_Os06g22560 LOC_Os05g01440 LOC_Os09g29840 LOC_Os08g03450 LOC_Os04g42270 LOC_Os07g46750 LOC_Os08g39500 LOC_Os08g02410 LOC_Os08g03640 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00230 rn01100 rn01110 |
| Metacyc Pathways | DENOVOPURINE2-PWY PWY-841 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g61600.1 |
| Rice Genome Annotation | LOC_Os03g61600.1 |
| Ricechip | LOC_Os03g61600.1 |
| KEGG | osa:4334671 dosa:Os03t0831500-01 |
| Entrez-Gene | 4334671 |