RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g61620.1 View Network Show in Genome Browser |
| Other Names | Os03g0831700 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 34932350-34937394 Nucleotide Length: 2661 |
| Protein-coding | LOC_Os03g61620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g14610 LOC_Os02g45310 LOC_Os03g17840 LOC_Os02g47880 LOC_Os01g51840 LOC_Os01g08520 LOC_Os02g57120 LOC_Os01g71474 LOC_Os02g40100 LOC_Os01g39830 LOC_Os03g45619 More.. |
| Downstream Genes | LOC_Os07g38590 LOC_Os05g02820 LOC_Os07g40940 LOC_Os07g38060 LOC_Os07g48370 LOC_Os04g58130 LOC_Os04g54810 LOC_Os11g26340 LOC_Os05g11990 LOC_Os06g42800 LOC_Os04g46130 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1846a-5p osa-miR1846b-5p osa-miR1846c-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g61620.1 |
| Rice Genome Annotation | LOC_Os03g61620.1 |
| Ricechip | LOC_Os03g61620.1 |
| KEGG | osa:4334672 dosa:Os03t0831700-01 |
| Entrez-Gene | 4334672 |