RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g61640.1 View Network Show in Genome Browser |
| Other Names | Os03g0831900 |
| Description | ZOS3-23 - C2H2 zinc finger protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 34941602-34944655 Nucleotide Length: 609 |
| Protein-coding | LOC_Os03g61640 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g15700 LOC_Os02g01740 LOC_Os03g50850 LOC_Os02g16640 LOC_Os03g53220 LOC_Os02g37430 LOC_Os03g13760 LOC_Os02g01250 LOC_Os02g30624 LOC_Os01g40110 LOC_Os03g37330 More.. |
| Downstream Genes | LOC_Os08g45040 LOC_Os12g31840 LOC_Os05g07050 LOC_Os07g04850 LOC_Os09g07500 LOC_Os10g35550 LOC_Os10g34520 LOC_Os07g10256 LOC_Os04g39444 LOC_Os04g31950 LOC_Os09g25430 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5145 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g61640.1 |
| Rice Genome Annotation | LOC_Os03g61640.1 |
| Ricechip | LOC_Os03g61640.1 |
| KEGG | osa:4334674 dosa:Os03t0831900-01 |
| Entrez-Gene | 4334674 |