RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g61760.1 View Network Show in Genome Browser |
| Other Names | Os03g0833300 |
| Description | OsSPL6 - SBP-box gene family member, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 35008001-35015730 Nucleotide Length: 2910 |
| Protein-coding | LOC_Os03g61760 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g53300 LOC_Os01g52010 LOC_Os01g51980 LOC_Os03g12030 LOC_Os03g41080 LOC_Os01g21990 LOC_Os03g18890 LOC_Os03g31490 LOC_Os02g13560 LOC_Os01g42730 LOC_Os01g37630 More.. |
| Downstream Genes | LOC_Os06g03540 LOC_Os09g04440 LOC_Os09g35730 LOC_Os06g05890 LOC_Os09g15340 LOC_Os06g24540 LOC_Os10g35180 LOC_Os06g03560 LOC_Os09g17620 LOC_Os06g03700 LOC_Os08g43320 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g61760.1 |
| Rice Genome Annotation | LOC_Os03g61760.1 |
| Ricechip | LOC_Os03g61760.1 |
| KEGG | osa:4334685 dosa:Os03t0833300-02 |
| Entrez-Gene | 4334685 |