RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g61990.5 View Network Show in Genome Browser |
| Other Names | Os03g0836200 |
| Description | glycine-rich RNA-binding protein 7, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 35134112-35137327 Nucleotide Length: 618 |
| Protein-coding | LOC_Os03g61990 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g61220 LOC_Os02g52460 LOC_Os03g04780 LOC_Os03g59050 LOC_Os03g58810 LOC_Os02g15310 LOC_Os03g25450 LOC_Os03g22570 LOC_Os02g01560 LOC_Os01g25610 LOC_Os02g03670 More.. |
| Downstream Genes | LOC_Os10g39820 LOC_Os06g30020 LOC_Os08g03520 LOC_Os06g15990 LOC_Os07g10250 LOC_Os05g51500 LOC_Os09g02700 LOC_Os11g41890 LOC_Os05g30530 LOC_Os09g19560 LOC_Os04g52200 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR415 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g61990.5 |
| Rice Genome Annotation | LOC_Os03g61990.5 |
| Ricechip | LOC_Os03g61990.5 |
| KEGG | osa:4334703 dosa:Os03t0836200-01 |
| Entrez-Gene | 4334703 |