RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g62150.1 View Network Show in Genome Browser |
| Other Names | Os03g0837700 |
| Description | heat shock protein DnaJ, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 35207543-35208331 Nucleotide Length: 789 |
| Protein-coding | LOC_Os03g62150 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g16880 LOC_Os02g48110 LOC_Os02g39870 LOC_Os03g16860 LOC_Os01g62290 LOC_Os03g60620 LOC_Os03g50250 LOC_Os01g08560 LOC_Os01g49430 LOC_Os02g53420 LOC_Os03g11910 More.. |
| Downstream Genes | LOC_Os05g08840 LOC_Os11g08470 LOC_Os12g05760 LOC_Os11g47760 LOC_Os11g08440 LOC_Os05g23740 LOC_Os12g38180 LOC_Os12g14070 LOC_Os06g46600 LOC_Os05g30480 LOC_Os05g51360 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR169r-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g62150.1 |
| Rice Genome Annotation | LOC_Os03g62150.1 |
| Ricechip | LOC_Os03g62150.1 |
| KEGG | osa:4334712 dosa:Os03t0837700-00 |
| Entrez-Gene | 4334712 |