RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g62250.1 View Network Show in Genome Browser |
| Other Names | Os03g0839000,Os03g0839100 |
| Description | zinc finger, C3HC4 type domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 35256091-35264427 Nucleotide Length: 2112 |
| Protein-coding | LOC_Os03g62250 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g19760 LOC_Os03g17370 LOC_Os03g17350 LOC_Os01g61940 LOC_Os01g42900 LOC_Os03g57790 LOC_Os02g20310 LOC_Os01g68320 |
| Downstream Genes | LOC_Os07g27300 LOC_Os09g23640 LOC_Os04g58640 LOC_Os05g02870 LOC_Os05g02890 LOC_Os06g43680 LOC_Os04g56740 LOC_Os08g09240 LOC_Os04g53240 LOC_Os07g07240 LOC_Os05g08960 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g62250.1 |
| Rice Genome Annotation | LOC_Os03g62250.1 |
| Ricechip | LOC_Os03g62250.1 |
| KEGG | osa:4334720 osa:4334721 dosa:Os03t0839000-01dosa:Os03t0839100-01 |
| Entrez-Gene | 4334720 |