RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g62379.1 View Network Show in Genome Browser |
| Other Names | Os03g0840350 |
| Description | MYB family transcription factor, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 35335570-35337104 Nucleotide Length: 657 |
| Protein-coding | LOC_Os03g62379 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g32750 LOC_Os02g10060 LOC_Os03g45410 LOC_Os03g15650 LOC_Os03g53960 LOC_Os01g27040 LOC_Os01g48210 LOC_Os02g49720 LOC_Os03g51220 |
| Downstream Genes | LOC_Os11g16540 LOC_Os04g41490 LOC_Os05g23940 LOC_Os06g19980 LOC_Os05g46330 LOC_Os05g28320 LOC_Os04g28090 LOC_Os11g35390 LOC_Os12g39070 LOC_Os05g05780 LOC_Os06g08480 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g62379.1 |
| Rice Genome Annotation | LOC_Os03g62379.1 |
| Ricechip | LOC_Os03g62379.1 |