RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g62850.1 View Network Show in Genome Browser |
| Other Names | Os03g0845500 |
| Description | AMP-binding enzyme, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 35549164-35558048 Nucleotide Length: 2253 |
| Protein-coding | LOC_Os03g62850 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g06720 |
| Downstream Genes | LOC_Os10g34740 LOC_Os11g13800 LOC_Os06g06440 LOC_Os12g29990 LOC_Os04g53170 LOC_Os04g53130 LOC_Os04g53070 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00071 rn01100 |
| Metacyc Pathways | PWY-5143 PWY-5136 FAO-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g62850.1 |
| Rice Genome Annotation | LOC_Os03g62850.1 |
| Ricechip | LOC_Os03g62850.1 |
| KEGG | osa:4334764 dosa:Os03t0845500-01 |
| Entrez-Gene | 4334764 |