RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g63040.1 View Network Show in Genome Browser |
| Other Names | Os03g0847851,Os03g0847800 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 35647669-35653582 Nucleotide Length: 2010 |
| Protein-coding | LOC_Os03g63040 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g39290 |
| Downstream Genes | LOC_Os05g23950 LOC_Os04g14190 LOC_Os12g08070 LOC_Os04g14110 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR3979-3p osa-miR156a osa-miR156b-5p osa-miR156c-5p osa-miR156d osa-miR156e osa-miR156f-5p osa-miR156g-5p osa-miR156h-5p osa-miR156i osa-miR156j-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g63040.1 |
| Rice Genome Annotation | LOC_Os03g63040.1 |
| Ricechip | LOC_Os03g63040.1 |
| KEGG | osa:4334775 dosa:Os03t0847800-01 |