RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g63390.1 View Network Show in Genome Browser |
| Other Names | Os03g0850900 |
| Description | plastocyanin-like domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 35820760-35821532 Nucleotide Length: 378 |
| Protein-coding | LOC_Os03g63390 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0009856 | pollination | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0030312 | external encapsulating structure | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g25560 LOC_Os01g06580 LOC_Os02g40260 LOC_Os01g73980 LOC_Os02g33550 |
| Downstream Genes | LOC_Os07g01370 LOC_Os05g10210 LOC_Os12g34524 LOC_Os10g02040 LOC_Os10g06000 LOC_Os10g05990 LOC_Os10g05980 LOC_Os05g09704 LOC_Os05g13900 LOC_Os10g05970 LOC_Os06g21270 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR528-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g63390.1 |
| Rice Genome Annotation | LOC_Os03g63390.1 |
| Ricechip | LOC_Os03g63390.1 |
| KEGG | osa:4334798 dosa:Os03t0850900-01 |
| Entrez-Gene | 4334798 |