RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g63430.1 View Network Show in Genome Browser |
| Other Names | Os03g0851300 |
| Description | proteasome subunit, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 35833974-35838008 Nucleotide Length: 1332 |
| Protein-coding | LOC_Os03g63430 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g32800 LOC_Os03g11570 LOC_Os03g18690 LOC_Os02g38810 LOC_Os03g08280 LOC_Os02g54340 LOC_Os02g21970 LOC_Os02g11050 LOC_Os01g16190 LOC_Os01g70140 LOC_Os02g10640 More.. |
| Downstream Genes | LOC_Os04g40850 LOC_Os07g49150 LOC_Os04g56646 LOC_Os07g25420 LOC_Os06g09290 LOC_Os08g43640 LOC_Os09g37000 LOC_Os08g41730 LOC_Os08g43540 LOC_Os04g36700 LOC_Os05g30800 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g63430.1 |
| Rice Genome Annotation | LOC_Os03g63430.1 |
| Ricechip | LOC_Os03g63430.1 |
| KEGG | osa:4334802 dosa:Os03t0851300-01 |
| Entrez-Gene | 4334802 |