RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g63490.1 View Network Show in Genome Browser |
| Other Names | Os03g0851800 |
| Description | pantoate--beta-alanine ligase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 35865184-35867788 Nucleotide Length: 942 |
| Protein-coding | LOC_Os03g63490 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g12570 LOC_Os01g12560 LOC_Os03g03930 LOC_Os02g39790 LOC_Os01g60230 LOC_Os02g15550 LOC_Os01g40470 LOC_Os01g65350 LOC_Os02g36340 |
| Downstream Genes | LOC_Os04g32490 LOC_Os12g07350 LOC_Os10g38850 LOC_Os07g22600 LOC_Os09g37120 LOC_Os04g42090 LOC_Os05g40330 LOC_Os09g25620 LOC_Os05g08950 LOC_Os06g33710 LOC_Os05g35520 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00410 rn00770 rn01100 rn01110 |
| Metacyc Pathways | PWY-3921 PANTO-PWY PWY-3961 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g63490.1 |
| Rice Genome Annotation | LOC_Os03g63490.1 |
| Ricechip | LOC_Os03g63490.1 |
| KEGG | osa:4334806 dosa:Os03t0851800-01 |
| Entrez-Gene | 4334806 |