RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g63530.1 View Network Show in Genome Browser |
| Other Names | Os03g0852300 |
| Description | histone-like transcription factor and archaeal histone, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 35890202-35894172 Nucleotide Length: 912 |
| Protein-coding | LOC_Os03g63530 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g70890 LOC_Os02g49370 |
| Downstream Genes | LOC_Os09g39490 LOC_Os08g29500 LOC_Os07g41580 LOC_Os08g35220 LOC_Os04g06770 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g63530.1 |
| Rice Genome Annotation | LOC_Os03g63530.1 |
| Ricechip | LOC_Os03g63530.1 |
| KEGG | osa:4334810 dosa:Os03t0852300-01 |
| Entrez-Gene | 4334810 |