RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g63910.1 View Network Show in Genome Browser |
| Other Names | Os03g0856100,Os03g0856200 |
| Description | PPR repeat domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 36107251-36110942 Nucleotide Length: 2415 |
| Protein-coding | LOC_Os03g63910 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g05812 LOC_Os03g55310 LOC_Os03g11230 LOC_Os01g74190 LOC_Os02g14059 LOC_Os01g73160 LOC_Os01g19450 |
| Downstream Genes | LOC_Os03g63920 LOC_Os12g37610 LOC_Os04g35090 LOC_Os09g29840 LOC_Os04g51280 LOC_Os12g42876 LOC_Os11g23790 LOC_Os06g35730 LOC_Os05g11710 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00230 rn00680 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g63910.1 |
| Rice Genome Annotation | LOC_Os03g63910.1 |
| Ricechip | LOC_Os03g63910.1 |
| KEGG | osa:4334836 osa:9267125 dosa:Os03t0856100-01dosa:Os03t0856200-04 |
| Entrez-Gene | 4334836 |