RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g01230.2 View Network Show in Genome Browser |
| Other Names | Os04g0102500 |
| Description | phosphoglycerate mutase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 177464-182245 Nucleotide Length: 828 |
| Protein-coding | LOC_Os04g01230 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g51590 LOC_Os03g50810 LOC_Os03g01180 LOC_Os03g18310 LOC_Os03g14040 LOC_Os02g42380 LOC_Os03g55930 LOC_Os02g53200 LOC_Os03g39830 LOC_Os03g32790 LOC_Os02g38240 More.. |
| Downstream Genes | LOC_Os11g05260 LOC_Os08g37140 LOC_Os05g04960 LOC_Os11g31880 LOC_Os09g11510 LOC_Os04g14760 LOC_Os05g07130 LOC_Os06g01950 LOC_Os06g05550 LOC_Os05g20930 LOC_Os08g10570 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g01230.2 |
| Rice Genome Annotation | LOC_Os04g01230.2 |
| Ricechip | LOC_Os04g01230.2 |
| KEGG | osa:4334891 dosa:Os04t0102500-01 |
| Entrez-Gene | 4334891 |