RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g01250.3 View Network Show in Genome Browser |
| Other Names | Os04g0102700 |
| Description | amidase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 187797-197110 Nucleotide Length: 1452 |
| Protein-coding | LOC_Os04g01250 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g44820 LOC_Os02g49050 |
| Downstream Genes | LOC_Os11g34210 LOC_Os08g04280 LOC_Os06g02220 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g01250.3 |
| Rice Genome Annotation | LOC_Os04g01250.3 |
| Ricechip | LOC_Os04g01250.3 |
| KEGG | osa:4334893 dosa:Os04t0102700-01 |
| Entrez-Gene | 4334893 |