RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g01540.1 View Network Show in Genome Browser |
| Other Names | Os04g0105700 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 370770-372421 Nucleotide Length: 756 |
| Protein-coding | LOC_Os04g01540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g43070 LOC_Os03g21900 LOC_Os01g71190 LOC_Os01g69950 LOC_Os01g33160 LOC_Os01g44210 |
| Downstream Genes | LOC_Os11g32320 LOC_Os07g06450 LOC_Os04g38750 LOC_Os09g32030 LOC_Os06g02380 LOC_Os08g41990 LOC_Os12g34890 LOC_Os12g02380 LOC_Os04g39610 LOC_Os11g02450 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g01540.1 |
| Rice Genome Annotation | LOC_Os04g01540.1 |
| Ricechip | LOC_Os04g01540.1 |
| KEGG | osa:4334910 dosa:Os04t0105700-01 |
| Entrez-Gene | 4334910 |