RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g01590.1 View Network Show in Genome Browser |
| Other Names | Os04g0106300 |
| Description | arginase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 396481-400947 Nucleotide Length: 1023 |
| Protein-coding | LOC_Os04g01590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g44150 LOC_Os01g49290 LOC_Os02g47590 LOC_Os03g51050 LOC_Os03g54160 LOC_Os03g13240 LOC_Os03g13250 LOC_Os01g42470 LOC_Os01g04950 LOC_Os03g45170 LOC_Os02g42230 More.. |
| Downstream Genes | LOC_Os07g01820 LOC_Os05g03830 LOC_Os05g47890 LOC_Os12g41500 LOC_Os09g21110 LOC_Os05g06350 LOC_Os09g32650 LOC_Os07g41370 LOC_Os07g01070 LOC_Os10g30090 LOC_Os07g27780 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00330 rn01100 rn01110 |
| Metacyc Pathways | PWY-31 ARG-PRO-PWY PWY-4984 ARGASEDEG-PWY CITRULBIO-PWY ARG-GLU-PWY PWY-40 PWY0-823 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g01590.1 |
| Rice Genome Annotation | LOC_Os04g01590.1 |
| Ricechip | LOC_Os04g01590.1 |
| KEGG | osa:4334912 dosa:Os04t0106300-01 |
| Entrez-Gene | 4334912 |