RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g01600.1 View Network Show in Genome Browser |
| Other Names | Os04g0106400 |
| Description | erythronate-4-phosphate dehydrogenase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 400957-405125 Nucleotide Length: 990 |
| Protein-coding | LOC_Os04g01600 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g26814 LOC_Os01g42850 LOC_Os01g71300 LOC_Os03g51080 LOC_Os02g03100 LOC_Os02g08480 LOC_Os03g13300 LOC_Os02g16550 LOC_Os02g11050 LOC_Os01g12800 LOC_Os01g34480 More.. |
| Downstream Genes | LOC_Os04g48820 LOC_Os08g36320 LOC_Os04g27060 LOC_Os04g26910 LOC_Os10g11140 LOC_Os10g37660 LOC_Os07g25420 LOC_Os07g44660 LOC_Os04g39040 LOC_Os04g26870 LOC_Os04g37460 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g01600.1 |
| Rice Genome Annotation | LOC_Os04g01600.1 |
| Ricechip | LOC_Os04g01600.1 |
| KEGG | osa:4334913 dosa:Os04t0106400-01 |
| Entrez-Gene | 4334913 |