RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g01690.3 View Network Show in Genome Browser |
| Other Names | Os04g0107600 |
| Description | pyridoxal-dependent decarboxylase protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 465169-467284 Nucleotide Length: 1872 |
| Protein-coding | LOC_Os04g01690 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g58510 LOC_Os03g19280 LOC_Os03g60976 LOC_Os03g60992 LOC_Os01g49890 |
| Downstream Genes | LOC_Os05g47640 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g01690.3 |
| Rice Genome Annotation | LOC_Os04g01690.3 |
| Ricechip | LOC_Os04g01690.3 |
| KEGG | osa:4334917 dosa:Os04t0107600-01 |
| Entrez-Gene | 4334917 |